PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM67711.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 582aa MW: 61844.8 Da PI: 7.2264

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM67711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.6	2.8e-08	202	246	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r++W++ Ed+ l+ av++ G g+W+ I + Rt+ q+ rw OWM67711.1 202 RKPWSKAEDLELIAAVQKCGEGNWANILKSDFkGDRTASQLSQRW 246 789************************875222488888888888 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MTDFEAKEPK INGKASITEE DMSILLQRYP APTVLTLLQE VANFRGAKID WESLVRNSST 60 GISNAREYQM LWRHLAYRDT LPEKMEDDAE PVNDDSDLEL ELEASPAVSR ESSAEAAASV 120 KVLIASGLPS ESTVSNNLTV EAPLTINVLN GQSSKGRSEI LQAPSSTHSL NITVPVSVQK 180 QPMPTVASSG GLDGNLPLKK KRKPWSKAED LELIAAVQKC GEGNWANILK SDFKGDRTAS 240 QLSQRWAIIR KRQKNLNVGA GSLTSTQLSE AQVAANRAMS LALGRPERIL TSGTGNKLAQ 300 NQSQPAALMP PKPSPAVESS SMVKSVVSIK RSPPKPSTDT DSTKITAAAV AAGARIATPL 360 DAASLMMTAQ AKKTVRVIPS GGSSVIKHTM SGGSAISGAF PNVHHIRTGL SSPPLSGQAA 420 STSSATRISL VKPASDTVHS GPVMNSQQVD AKPVESTKPP LEQEAKCKNE REVFKPCNVP 480 KDQSQEHGVC VLDKHPSPQV EMATTPQAQA ETREQVNVEK EAKEGESLNP DKTAVCSDAT 540 GIGTQPAAKK IPEEPSTDGK PGEDLPGLAV DKERAEEVQV LR

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MTDFEAKEPK INGKASITEE DMSILLQRYP APTVLTLLQE VANFRGAKID WESLVRNSST  60
GISNAREYQM LWRHLAYRDT LPEKMEDDAE PVNDDSDLEL ELEASPAVSR ESSAEAAASV  120
KVLIASGLPS ESTVSNNLTV EAPLTINVLN GQSSKGRSEI LQAPSSTHSL NITVPVSVQK  180
QPMPTVASSG GLDGNLPLKK KRKPWSKAED LELIAAVQKC GEGNWANILK SDFKGDRTAS  240
QLSQRWAIIR KRQKNLNVGA GSLTSTQLSE AQVAANRAMS LALGRPERIL TSGTGNKLAQ  300
NQSQPAALMP PKPSPAVESS SMVKSVVSIK RSPPKPSTDT DSTKITAAAV AAGARIATPL  360
DAASLMMTAQ AKKTVRVIPS GGSSVIKHTM SGGSAISGAF PNVHHIRTGL SSPPLSGQAA  420
STSSATRISL VKPASDTVHS GPVMNSQQVD AKPVESTKPP LEQEAKCKNE REVFKPCNVP  480
KDQSQEHGVC VLDKHPSPQV EMATTPQAQA ETREQVNVEK EAKEGESLNP DKTAVCSDAT  540
GIGTQPAAKK IPEEPSTDGK PGEDLPGLAV DKERAEEVQV LR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	198	204	LKKKRKP
2	199	204	KKKRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	5e-71	MYB_related family protein