PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM67931.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

DBB

Protein Properties

Length: 243aa MW: 27011.5 Da PI: 4.6269

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM67931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.7	4.2e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C le H H++ OWM67931.1 4 QCDVCERAPATVICCADEAALCAKCDLEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	30	1e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + + C+ + ek++ +fC +++ l+C+dC + +H+ H OWM67931.1 53 KLPLCDICREKPAFIFCVEDRALFCQDCDEPIHSAsslsanH 94 6799*****************************656666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MKIQCDVCER APATVICCAD EAALCAKCDL EVHAANKLAS KHQRLLLQSL SNKLPLCDIC 60 REKPAFIFCV EDRALFCQDC DEPIHSASSL SANHQRFLAT GIRVALSSSS NCTKDAEKTD 120 GEPPSKKGPQ PVMKTPQQQQ QQSPSFASSW GMDELLQFPD FDSSDKKEQL EFGELDWIAD 180 MGLFSDQIPP QEGLAAAEVP QLPLQTSHNY APYRTAKSNM PQKKPRFEIR DDDDEYFTVP 240 DLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31380.1	6e-90	DBB family protein