PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68091.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 216aa    MW: 24188.7 Da    PI: 4.9242
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68091.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.5e-1980131256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr ++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g+
  OWM68091.1  80 SYRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEAAAMAYDQAAFSMRGH 131
                 69*******.**********44465..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MDSSIFHSPN YSDFSSESSY SWDNLKLDNN SLPFNENDSE EMLLFGLLAE ASSQSKDEEV  60
SWMKEEEGDD GEQSPKKEKS YRGVRKRPWG KFAAEIRDST RNGVRVWLGT FDSAEAAAMA  120
YDQAAFSMRG HAAVLNFPVE KVRESLRGMK QLSTEGGGSP VIALKKKHSM RRKMSGKRSR  180
DSSSGRGDNV VVFEDLGSDY LEQLLISSSP ECETTW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-49ERF family protein