PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68493.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 141aa    MW: 15871.4 Da    PI: 7.6621
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68493.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.46.2e-15127765128
         NAM  65 dkkyatgkrknr.atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++++++++ ++r + ++gyWk   +dk++++  +ge++g kktL+fy++r+++g  t+W mhey l
  OWM68493.1  12 KRSTRSNNWSERtIPNAGYWKIIRSDKKLKRDdTGEEIGKKKTLTFYRERNSSGIMTNWGMHEYYL 77 
                 34444566777745679************99878899***************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MEGSGSSSVS EKRSTRSNNW SERTIPNAGY WKIIRSDKKL KRDDTGEEIG KKKTLTFYRE  60
RNSSGIMTNW GMHEYYLNPS YLGYNNEEMP FVVCHVLKRS GRRGGDDAVL ASHSDDDSGH  120
SAVSERSATT QEAAPNEVIY V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.22e-12NAC family protein