PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68494.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 266aa MW: 30371.2 Da PI: 6.8556

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	109.6	3.5e-34	7	147	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkk......leleev.ikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatg 87 pG+ F+P+ l+++yLk+++ ++ +++++ i+++++yk++P++Lp+ +++++ ++w+fF+ r+++y++++r++r + + gyWk t OWM68494.1 7 PGLDFDPSSILLLTHYLKQRILDHFhsgnpnYSMNHHlIPDIELYKWDPEELPRqydrlaEARSNGRQWFFFCLRKENYRNNSRSERtIPNVGYWKITS 105 9*****************998876677774444445**********954787765666888****************55669*** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +dk+v+s+ +g+++g kktL+fy+gr+++g t+W mhey+l OWM68494.1 106 SDKKVKSEdTGKEIGKKKTLTFYRGRSSSGIVTNWGMHEYHL 147 **9978899**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MEIPHIPGLD FDPSSILLLT HYLKQRILDH FHSGNPNYSM NHHLIPDIEL YKWDPEELPR 60 QYDRLAEARS NGRQWFFFCL RKENYRNNSR SERTIPNVGY WKITSSDKKV KSEDTGKEIG 120 KKKTLTFYRG RSSSGIVTNW GMHEYHLNPS YLDYNIEEGS PQSVAPSRLD VVKRPYGLNH 180 KGFHKTTASY RLEDDVGECL VYESRRVGKQ EGPEDKEQEP MACVTSKAAL LGMECANVRP 240 ANEPSSLDAV LPSIAELSLG LLNADA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	1e-27	NAC family protein