PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68564.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 204aa    MW: 23126.8 Da    PI: 6.9122
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68564.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.9e-0810322447
                     HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47
                     W++Ia++++ gRt++++k++w+++
       OWM68564.1 10 WSLIAARLP-GRTANDLKNFWNTH 32
                     *********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MICDYINHWW SLIAARLPGR TANDLKNFWN THVVKKGNAS RKDLSHHQKH KPQNPVKVNV  60
IKPRPRTFKT AARIRPEGEA TTLMASPPGW AGVLHGDEHL SSKPPAPPHQ SQPASLENEV  120
TWWESLFPLS DKSSDEEGSR GMDTTSHSLN TNSNSCSLLC GHLWSREMVD DYQQQHDNGW  180
NNEFFDDMAL SWWEVPGVSN QIIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.16e-14MYB family protein