PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68616.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HD-ZIP

Protein Properties

Length: 257aa MW: 28645.9 Da PI: 6.1808

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.2	1.3e-18	40	94	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le+ Fe++ ++ +++ + A++lgL+ rqV +WFqN+Ra++k OWM68616.1 40 SNKRRFSDEQIRSLETIFESETRLDPRKKLQVARELGLQPRQVAIWFQNKRARWK 94 56789*************************************************9 PP
2	HD-ZIP_I/II	120	1.2e-38	41	132	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+++LE+ Fe+e++L+p++K ++areLglqprqva+WFqn+RAR+k+kqlE+dy+ L++ y +l+++ e+L+ke+++L ++l++ OWM68616.1 41 NKRRFSDEQIRSLETIFESETRLDPRKKLQVARELGLQPRQVAIWFQNKRARWKSKQLEHDYAILRADYTQLASRLESLKKEKHALISQLEK 132 79*************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MLGDAPGELY YSPSGLAMEA FDYVNPSWRQ IKKGKGRGKS NKRRFSDEQI RSLETIFESE 60 TRLDPRKKLQ VARELGLQPR QVAIWFQNKR ARWKSKQLEH DYAILRADYT QLASRLESLK 120 KEKHALISQL EKLKDLADKG AAAASAVTDG DRSGVEDETK TEPPAAAAAA AAAAAAPALL 180 LSDGVSSIKA EWNLGILEEE DDHHHRHQDD SESLKMNMDV MDKGSSLSST RHGPSPSLNS 240 DDLLNDSSPT QWWDFWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	6e-42	HD-ZIP family protein