PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68639.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 182aa    MW: 20249.6 Da    PI: 4.9824
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-183484155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f  +e+Aaka++ a+ +l+g
  OWM68639.1 34 PVYHGVRKRR-WGKWVSEIREPRK---KSRIWLGSFPVPEMAAKAYDVAAYCLRG 84
                68*****887.**********843...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MGVEQLHRPP SPEAGDVSPS AAAATSRRGG TRHPVYHGVR KRRWGKWVSE IREPRKKSRI  60
WLGSFPVPEM AAKAYDVAAY CLRGSKAQLN FPDEVEELPL PNTCTGRDIQ AAAAKAAASK  120
KINVIINDND NRGEEEEEDD FWEKIELPEI LMSGENLSLC DHWQGRGWGA TLAIDDVEDD  180
NN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.15e-48ERF family protein