PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68749.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 195aa MW: 22815.8 Da PI: 9.8395

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.1	8.4e-13	52	90	3	42
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcks 42 WT eEd +lv +vk++G + W+ Ia+++ gR +k c++ OWM68749.1 52 QWTHEEDRKLVSLVKEYGEKKWAQIAEKLA-GRRGKRCRH 90 7***************************.******8 PP
2	Myb_DNA-binding	42.9	1.2e-13	101	139	3	43
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 +W++eE+ lv+a+++ G+ W+ I ++++ gRt++ +k++ OWM68749.1 101 SWSEEEERMLVEAHEKVGNQ-WAEITKYIP-GRTENTIKNH 139 6***************99.*****.*******9 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MEGDHRVVEE GGVSLNGKLR RKPHHNQPLT AIDREEISCE ERQLESFDKG SQWTHEEDRK 60 LVSLVKEYGE KKWAQIAEKL AGRRGKRCRH NHLRPDIKKY SWSEEEERML VEAHEKVGNQ 120 WAEITKYIPG RTENTIKNHR NATKRSLQNS RQKNKAINSQ NILSPHPSVL EDYIRWKNCQ 180 APTPNPPPML SLRLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	1e-48	MYB family protein