PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68796.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 143aa    MW: 16795.1 Da    PI: 6.5144
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS115.75.8e-361141234374
        GRAS 234 lsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332
                 ++P+v+v +  + +h s+ F++rf eal+++salfd++++++p +s er+++E+e+ gr + nv++ceg+er+er et+++W++r+ +aGF++vpl+  
  OWM68796.1   1 MKPDVFVPSVVNGSHKSPFFMTRFKEALHHFSALFDMMDVNMPWDSPERMFIEEEYYGRGAINVISCEGTERFERPETYKQWQNRVAKAGFRQVPLDRG 99 
                 589************************************************************************************************ PP

        GRAS 333 aakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   +  ++ l+++ +   +v e++++l++g ++r +++ S W+
  OWM68796.1 100 LLEIYQARLKEHCNGDLMVYEDNKWLLQGYQGRIIYASSGWT 141
                 *********9999666*************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MKPDVFVPSV VNGSHKSPFF MTRFKEALHH FSALFDMMDV NMPWDSPERM FIEEEYYGRG  60
AINVISCEGT ERFERPETYK QWQNRVAKAG FRQVPLDRGL LEIYQARLKE HCNGDLMVYE  120
DNKWLLQGYQ GRIIYASSGW TSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29065.13e-51GRAS family protein