PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68830.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 253aa MW: 29251.7 Da PI: 5.5145

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	8.8e-17	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +lv+ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl OWM68830.1 8 KGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYL 55 79********************************************97 PP
2	Myb_DNA-binding	56	9.4e-18	61	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++l ++++ ++G++ W++Iar+++ gRt++++k++w++++ OWM68830.1 61 RGKMTPQEEKLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 106 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MVREEIRKGP WTEQEDFQLV CFVGLFGDRR WDFIAKVSGL NRTGKSCRLR WVNYLHPGLK 60 RGKMTPQEEK LVLELHSKWG NRWSRIARKL PGRTDNEIKN YWRTHMRKKA QEKKRTVSLA 120 SSSSNSCSSA SNDSKVDSLP SKETGEESFY DTGGPETSAS MEIKGKEEEK YKEHAVDDIW 180 QEIALSEENA ITPANDCYSE EGCNFFCPQM ISPTWEYSAD SLWRMPDEEG KMFPPVRDPL 240 FSYYEEDVAY LSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46130.1	7e-92	MYB family protein