PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68902.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

ARF

Protein Properties

Length: 682aa MW: 74707.8 Da PI: 8.8666

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.7	2.6e-24	111	212	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g+ W++++iyr++++r++lt+GW++Fv++++L +gD++vF +++++el OWM68902.1 111 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVIARDVHGEMWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFL--RDENGEL 205 89**************************996555555..8*********************************************..569999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ OWM68902.1 206 CVGIRRT 212 *****97 PP
2	Auxin_resp	108.7	6e-36	271	354	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a++ a+ +++Fevv++Prast+eF+ k+++v++a++v+++ GmRfkmafetedss++++ Gt+++v+ +dp+rWpnS+Wr+L+ OWM68902.1 271 AVSLAARGQPFEVVFYPRASTPEFCMKASSVRAATRVQWCSGMRFKMAFETEDSSRISWfLGTISSVQVIDPTRWPNSPWRLLQ 354 6778999***************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MKETEKSTLD PQLWHACAGS MVQMPPVNST VFYFPQGHAE HASSPVDFSS SPKIAPLILC 60 TVSSVKFLAD PETDEVYAKI RLVPLPSSGL DFNSGDEVFS NSGEKEKPAS FAKTLTQSDA 120 NNGGGFSVPR YCAETIFPRL DYSADPPVQT VIARDVHGEM WKFRHIYRGT PRRHLLTTGW 180 SSFVNQKKLV AGDSIVFLRD ENGELCVGIR RTKRGLGAPP DSPASWTYSG FSVMLRKGGD 240 SKLARNNGAG KSTGPEGFGR GKVSPESVIE AVSLAARGQP FEVVFYPRAS TPEFCMKASS 300 VRAATRVQWC SGMRFKMAFE TEDSSRISWF LGTISSVQVI DPTRWPNSPW RLLQVTWDEP 360 DLLQNVTRVS PWLVELVSSI PIIHMSPFSP PSKKYRLPQH HASFPSLDGH LLVPPFSGNL 420 LGGHTSTSCL LPDNFAPASI QGARHNHFPS IFTDLNLSTK LPLGPFGLFP PIDPHKVTVP 480 VSTEKGRDSE SLSCSLKIGY PSQNNSEKPA SEKKRKFLLF GQTILTEQQI ISQSTLSDTT 540 SDRAKALLGP KRSSNANLGF SLARDIRDLG LGLNTGHCKV FLESEDVGRT LDLSAVVSYE 600 ELYHRLVAMF GIERSDLQGH VLYEDAMGVV RKAGNEPFSD FIRTAKRLTI LMDSGSKSIG 660 RALISRSGFE SSTKSGPLST YA

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MKETEKSTLD PQLWHACAGS MVQMPPVNST VFYFPQGHAE HASSPVDFSS SPKIAPLILC  60
TVSSVKFLAD PETDEVYAKI RLVPLPSSGL DFNSGDEVFS NSGEKEKPAS FAKTLTQSDA  120
NNGGGFSVPR YCAETIFPRL DYSADPPVQT VIARDVHGEM WKFRHIYRGT PRRHLLTTGW  180
SSFVNQKKLV AGDSIVFLRD ENGELCVGIR RTKRGLGAPP DSPASWTYSG FSVMLRKGGD  240
SKLARNNGAG KSTGPEGFGR GKVSPESVIE AVSLAARGQP FEVVFYPRAS TPEFCMKASS  300
VRAATRVQWC SGMRFKMAFE TEDSSRISWF LGTISSVQVI DPTRWPNSPW RLLQVTWDEP  360
DLLQNVTRVS PWLVELVSSI PIIHMSPFSP PSKKYRLPQH HASFPSLDGH LLVPPFSGNL  420
LGGHTSTSCL LPDNFAPASI QGARHNHFPS IFTDLNLSTK LPLGPFGLFP PIDPHKVTVP  480
VSTEKGRDSE SLSCSLKIGY PSQNNSEKPA SEKKRKFLLF GQTILTEQQI ISQSTLSDTT  540
SDRAKALLGP KRSSNANLGF SLARDIRDLG LGLNTGHCKV FLESEDVGRT LDLSAVVSYE  600
ELYHRLVAMF GIERSDLQGH VLYEDAMGVV RKAGNEPFSD FIRTAKRLTI LMDSGSKSIG  660
RALISRSGFE SSTKSGPLST YA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein