PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68910.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 563aa MW: 63123.2 Da PI: 8.0506

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68910.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.8	1.6e-10	474	522	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 ++WT+ E ++l++++ lG g+W++I + + k+Rt ++k++w+++ OWM68910.1 474 MPWTQSEVLKLIEGISHLGVGRWSKIKKLLFassKHRTSVDLKDKWRNL 522 69*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MTDAAVKDAF INMDMDENKN IFTSYPAEAD RHVSFLTAFE DEVMGAEHAF LGHECDKDLV 60 GGHLGFGTYD LQKCFSVGNI SSALEYDEII NGDAVNSTLN VGEEAEKEFF NGMLQGTDER 120 ILREHNLRRH ASNEHSLDTR VMGGHFNNTY SKSEKSCLRE NLELENGAQA LGRADREADM 180 SGLASEKACI ELRNGKNSAL FDQMTVQELQ ETFRVMFGRE TMVEDKHWLK RRLLFGLENN 240 SELEEHLNLV RCRTAFNENE VKKAPTSSCT QDGGSLVEEK PKGIVTNSLA TLSSELAETG 300 TSSQDKGDEG LVIIGKRLHK PPRRYIEESL EPKSRSSSRR RCATIQKALK VKPLGVKSPK 360 QPSKQPPKQL PRKGNGAVLS VHEEEPFNGA CIQVPFGLPV EEEQVKETPS SLTLSIVSCH 420 DSDNCPSNQS TISNERSDAE CLSVSAKLQE NISKTDREAR TNVQKGKRRR KHHMPWTQSE 480 VLKLIEGISH LGVGRWSKIK KLLFASSKHR TSVDLKDKWR NLVKASCTQL RKKRKGVQGR 540 KQLTHQAPEP VLRRVRELAN LYS

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MTDAAVKDAF INMDMDENKN IFTSYPAEAD RHVSFLTAFE DEVMGAEHAF LGHECDKDLV  60
GGHLGFGTYD LQKCFSVGNI SSALEYDEII NGDAVNSTLN VGEEAEKEFF NGMLQGTDER  120
ILREHNLRRH ASNEHSLDTR VMGGHFNNTY SKSEKSCLRE NLELENGAQA LGRADREADM  180
SGLASEKACI ELRNGKNSAL FDQMTVQELQ ETFRVMFGRE TMVEDKHWLK RRLLFGLENN  240
SELEEHLNLV RCRTAFNENE VKKAPTSSCT QDGGSLVEEK PKGIVTNSLA TLSSELAETG  300
TSSQDKGDEG LVIIGKRLHK PPRRYIEESL EPKSRSSSRR RCATIQKALK VKPLGVKSPK  360
QPSKQPPKQL PRKGNGAVLS VHEEEPFNGA CIQVPFGLPV EEEQVKETPS SLTLSIVSCH  420
DSDNCPSNQS TISNERSDAE CLSVSAKLQE NISKTDREAR TNVQKGKRRR KHHMPWTQSE  480
VLKLIEGISH LGVGRWSKIK KLLFASSKHR TSVDLKDKWR NLVKASCTQL RKKRKGVQGR  540
KQLTHQAPEP VLRRVRELAN LYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	6e-33	MYB_related family protein