PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68919.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 321aa MW: 36160.6 Da PI: 8.422

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.7e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl OWM68919.1 14 KGPWSPEEDSKLKEYIEKYGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	41.1	4.1e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd +++ +++ G++ W+ Ia+ ++ gRt++++k++w++ OWM68919.1 69 GEFSDEEDRIILALFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MGRAPCCDKA IVKKGPWSPE EDSKLKEYIE KYGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNLKHGE FSDEEDRIIL ALFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGM 120 MIPNPNHRII KPSPSSQTFP VAVNLNYHQN SPLFFPSQPL SSSLLYRDNI YYPSSNYTPN 180 VAPITTKSSL FTSLDFSSSP VPTPTLLTDN SSYRADPSSM FQTHEGNVAN PLHMQQYDND 240 SSQMIIKKER TDHQLQSFLS SGSEESYPQI NQWEDKRNDG YYGESNNVGS SAIDYDLEEV 300 KRLIGSSNSG CGNSNFLSSL F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	5e-78	MYB family protein