PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68937.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 290aa MW: 31084.5 Da PI: 6.3695

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68937.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00084	116	138	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H OWM68937.1 116 YECKTCNRVFPSFQALGGHRASH 138 99**********99999998887 PP
2	zf-C2H2	11.8	0.00076	196	218	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg F + L H+r+H OWM68937.1 196 HECSVCGLEFASGQALGGHMRRH 218 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MENRPEQSLG LSDPSRVIKR QRARRPRHLP SPRGSTTPTA ASSSSSVGGG DYNSVVDAAE 60 GEDEDMANCL ILLAQGDGTA SPNDHQEHVA QEESIPQGVI NSGVRSKKVS ELGVVYECKT 120 CNRVFPSFQA LGGHRASHSK PTKANGMLLE DQLINRTRDH DHHQEGQIYR TNLSPGPTPV 180 LGLPGMSLGA RTGKVHECSV CGLEFASGQA LGGHMRRHRS SSALMNSDEP AVSARPDDLN 240 QKPRKFLALD LNLPAPEEDD DGDSIFGYGP GQPVPPPLFI SASALVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	1e-42	C2H2 family protein