PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69054.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family YABBY
Protein Properties Length: 209aa    MW: 23370.5 Da    PI: 8.7677
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY2391e-7321752170
       YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslk....eelleelkveeenlksnvekees.asts 95 
                 ++  +se+vCyvqCnfCntilavsvP +s+++vvtvrCGhC++ll+vn+a as +    ++l+++ +    eel++  + +++++++n+ ++++ +s+ 
  OWM69054.1   2 SLEMASERVCYVQCNFCNTILAVSVPCSSMYTVVTVRCGHCANLLTVNMAGASLQPLPLQELQKQQHligpEELMKGSGPSSSKCNTNNNTHNKcTSSL 100
                 67789*********************************************9995544444455543311224588888888888877766555404455 PP

       YABBY  96 vsseklsenedeev.prvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                 +s+ + ++++d+   pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl
  OWM69054.1 101 ESAPHHQQQQDQPPpPRIPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 175
                 55555444444444145555.9****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MSLEMASERV CYVQCNFCNT ILAVSVPCSS MYTVVTVRCG HCANLLTVNM AGASLQPLPL  60
QELQKQQHLI GPEELMKGSG PSSSKCNTNN NTHNKCTSSL ESAPHHQQQQ DQPPPPRIPP  120
IRPPEKRQRV PSAYNRFIKE EIQRIKASNP DISHREAFST AAKNWAHFPH IHFGLKLEGN  180
MNKQSKLDHH SSINGGDHHL HPKTSHGFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.13e-42YABBY family protein