PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69161.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 469aa    MW: 52250.9 Da    PI: 6.3597
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS440.41.3e-134474661374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl+cA+ vssg+l++a+ +L ++s+l+s +gd+mqR+aayf+eALa r+ +s+++l +al++++ s    s+e+ + klf+e++P+lk ++++aN
  OWM69161.1  47 LIHLLLACANYVSSGSLSNANVALDQISQLSSMNGDTMQRIAAYFAEALADRIIKSWPGLHRALNSTRVS--ILSDEMLVKKLFFEMFPFLKAGFVLAN 143
                 689*************************************************************998887..6999*********************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaI ea+ege++vH+iD+  s++ QW++LlqaL++R++gpp+lRiTg+++    +k  l  +++rLa+ Ae+l++pf+fn+ v+++l++l++++Lrvk+
  OWM69161.1 144 QAIIEAMEGEKMVHVIDLCGSEPSQWIPLLQALSARSGGPPHLRITGIHP----EKPVLDGMAKRLAEEAEKLDIPFQFNP-VVSTLDSLDFDTLRVKT 237
                 **************************************************....99*************************.7**************** PP

        GRAS 199 gEalaVnlvlqlhrll.....................................................desvsleserdevLklvkslsPkvvvvveq 244
                 gEala+++ lq h+ll                                                       ++s +s+++++L+ +++lsPk+vvv+eq
  OWM69161.1 238 GEALAISSFLQFHTLLasddestrkrslfgsngihlqkllqmnrsssggllekdpangysgspdstsspPLTASCHSKIESFLSNLRGLSPKLVVVMEQ 336
                 *****************************************************************988855666667889******************* PP

        GRAS 245 eadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk 343
                 +++hn+ +++er++eal+ y+a+fd+le+++pr+s er k+E++++g+ei+n++acegaer+erhe+lekW  rl++ GFk+vpls+    qa++ll+ 
  OWM69161.1 337 DSNHNGLPLMERLTEALYSYAAMFDCLESTVPRTSVERLKLEKMMFGEEIKNIIACEGAERKERHERLEKWAWRLDTGGFKNVPLSYLSLLQARMLLQV 435
                 *************************************************************************************************** PP

        GRAS 344 vksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++ d yr++ee+g++v++W+dr+L+svSaW+
  OWM69161.1 436 YNCDSYRIKEENGCAVIYWQDRSLFSVSAWT 466
                 **999*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    
MDQDDGSSSA TSWPLQLFSK MSLPPSLGGS PYPWLRELKS EERGLYLIHL LLACANYVSS  60
GSLSNANVAL DQISQLSSMN GDTMQRIAAY FAEALADRII KSWPGLHRAL NSTRVSILSD  120
EMLVKKLFFE MFPFLKAGFV LANQAIIEAM EGEKMVHVID LCGSEPSQWI PLLQALSARS  180
GGPPHLRITG IHPEKPVLDG MAKRLAEEAE KLDIPFQFNP VVSTLDSLDF DTLRVKTGEA  240
LAISSFLQFH TLLASDDEST RKRSLFGSNG IHLQKLLQMN RSSSGGLLEK DPANGYSGSP  300
DSTSSPPLTA SCHSKIESFL SNLRGLSPKL VVVMEQDSNH NGLPLMERLT EALYSYAAMF  360
DCLESTVPRT SVERLKLEKM MFGEEIKNII ACEGAERKER HERLEKWAWR LDTGGFKNVP  420
LSYLSLLQAR MLLQVYNCDS YRIKEENGCA VIYWQDRSLF SVSAWTSRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein