PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69464.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 569aa MW: 62475.1 Da PI: 5.8127

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.6	2.4e-32	355	409	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLH rFveav++L G+ekAtPk +l+lm+v+gLt++hvkSHLQkYRl OWM69464.1 355 RPRMRWTPELHVRFVEAVNKLDGAEKATPKGVLKLMNVEGLTIYHVKSHLQKYRL 409 59****************************************************8 PP
2	Myb_DNA-binding	50.8	3.8e-16	357	408	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ ++v+av++l g t+k + + m+ +g+t +++ks++qky+ OWM69464.1 357 RMRWTPELHVRFVEAVNKLDGAekaTPKGVLKLMNvEGLTIYHVKSHLQKYR 408 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MMTMEGLGAP PPIARTLSKD LQEELQEQIE EEVEKAMGGS REKPSHYCDD AAMATPLSKD 60 IPVSRILKRV PLIPGNTDRA MMLYRLPFEE NSTKISRQVL AANCILVTAS SIYTPWLKGS 120 RAMNQQKITE IGPSKGLTHS CQKESPSSMA GDCSDLSMGS IVQAQKCCLR SGLAGPISPV 180 SPAHSLKSSF SRSSVFCTSL YQSSSTTSEA HRLLGNLPFL PHTPTYNRSL PGVDSTKSSS 240 LFSDDICNQG DERDSEEALM KDFLSLPGDS AEGSFHDINC TGDNSDLAEQ LELQYLSDEL 300 DMVMIDNGEN PRLDDIYGTQ QSSPKQAPEL NVNNSITAQG IDSPSSQSPS PNMHRPRMRW 360 TPELHVRFVE AVNKLDGAEK ATPKGVLKLM NVEGLTIYHV KSHLQKYRLA KYMPERKEEK 420 KTSSSEEKKA ASSNDCDGRR KGSTQLTEAL RMQMEVQKQL HEQLEVQKAL QLRIEEHAQY 480 LQKILEEQQK AGSALCQSTQ NLPSPKDSVP SDQAGSSNSD SGPPSESLKR KSSVDSDDHV 540 SEQKKKRLSL EGDSASTPSS EVISKSPLQ

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MMTMEGLGAP PPIARTLSKD LQEELQEQIE EEVEKAMGGS REKPSHYCDD AAMATPLSKD  60
IPVSRILKRV PLIPGNTDRA MMLYRLPFEE NSTKISRQVL AANCILVTAS SIYTPWLKGS  120
RAMNQQKITE IGPSKGLTHS CQKESPSSMA GDCSDLSMGS IVQAQKCCLR SGLAGPISPV  180
SPAHSLKSSF SRSSVFCTSL YQSSSTTSEA HRLLGNLPFL PHTPTYNRSL PGVDSTKSSS  240
LFSDDICNQG DERDSEEALM KDFLSLPGDS AEGSFHDINC TGDNSDLAEQ LELQYLSDEL  300
DMVMIDNGEN PRLDDIYGTQ QSSPKQAPEL NVNNSITAQG IDSPSSQSPS PNMHRPRMRW  360
TPELHVRFVE AVNKLDGAEK ATPKGVLKLM NVEGLTIYHV KSHLQKYRLA KYMPERKEEK  420
KTSSSEEKKA ASSNDCDGRR KGSTQLTEAL RMQMEVQKQL HEQLEVQKAL QLRIEEHAQY  480
LQKILEEQQK AGSALCQSTQ NLPSPKDSVP SDQAGSSNSD SGPPSESLKR KSSVDSDDHV  540
SEQKKKRLSL EGDSASTPSS EVISKSPLQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	529	547	KRKSSVDSDDHVSEQKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-101	G2-like family protein