PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69685.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB
Protein Properties Length: 322aa    MW: 34994.1 Da    PI: 6.8459
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.52.4e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd  l+++++++G+g +W + ++  g++R++k+c++rw++yl
       OWM69685.1 14 RGPWSPEEDAMLKEYIEKHGTGgNWIALPQNAGLRRCGKSCRLRWLNYL 62
                     89*********************************************97 PP
2Myb_DNA-binding31.54.2e-1069111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T  Ed  +  + +  G++ W+ Ia+ ++ gRt++++k++w++
       OWM69685.1  69 GDFTDFEDRVICTLYASIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111
                      568888999999999******.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGRAPCCDKA TVKRGPWSPE EDAMLKEYIE KHGTGGNWIA LPQNAGLRRC GKSCRLRWLN  60
YLRPNIKHGD FTDFEDRVIC TLYASIGSRW SVIAAQLPGR TDNDIKNYWN TKLKKKLMAV  120
LPAMISQSQR TASLVSPLQA ASSFLFSPLP HHIPSPPLPS LPSPSYYLPL ALQSSPLTHE  180
ISFENPMQHY QLQKDGSGSI AYGGSSGDGT CSSSEANCNF SSTSSTVGGT SSDRSVSYDF  240
YPYHGVEEKE NLVPASSGGG GSGCTVGGGE WTQKVAADKA WGENAVTADY GFEEIKQLIS  300
TNISTTSCFL FDENKVGESV YY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.13e-74MYB family protein