PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69755.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HD-ZIP

Protein Properties

Length: 245aa MW: 28083.4 Da PI: 7.0567

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.1	1.3e-17	39	91	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k OWM69755.1 39 KKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 91 4568889*********************************************9 PP
2	HD-ZIP_I/II	129.2	1.6e-41	37	127	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekk+rl+ eqvk+LE+sFe +kLeperK +lar+Lglqprq+a+WFqnrRAR+ktkqlE+dye+Lk+++dalk++ne+L++++e+L++el OWM69755.1 37 EKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLERDYEVLKKQCDALKADNENLQAQNEKLHNEL 127 69**************************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MRRSVSFSGI DHHHQKCEDG SGPGDDDLSD DASQLGEKKK RLNLEQVKAL EKSFELGNKL 60 EPERKLQLAR ALGLQPRQIA IWFQNRRARW KTKQLERDYE VLKKQCDALK ADNENLQAQN 120 EKLHNELLAL KRRNTTEAPS MKREIDQGSW GNNESCENSS EINLDLSRTS VMSSPISSSH 180 LSNSKHALPP SSRPLNLPRP DLQHCLKMDH PIVQEENLIC NMFNGIDDHQ NFWSWGAATE 240 QHQFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	94	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15150.1	2e-61	HD-ZIP family protein