PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69776.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family LBD
Protein Properties Length: 142aa    MW: 16397.1 Da    PI: 6.0016
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26032.13.1e-101415898
      DUF260 58 msslvyeAearardPvyGavgvilklqqqleqlkaelallk 98
                m+s++ye + ra+d vyG++g++ klqqq++++++el++++
  OWM69776.1  1 MTSIIYEVNGRAEDSVYGCYGTLIKLQQQVARAEQELKAIN 41
                79**********************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MTSIIYEVNG RAEDSVYGCY GTLIKLQQQV ARAEQELKAI NSWIASFRRS SEQPDDHDHR  60
YHPLSLPSNF WVYTHGRDIV NQADAAASLE IMKSSMVNQQ SRSQDRESSM VNEQPYRRNL  120
EASMVNERTH RSNLDPVIDE RP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.28e-08LBD family protein