PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69815.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 594aa MW: 64035.5 Da PI: 4.9821

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69815.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.4	1e-10	543	593	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 r+ W+ eE++ l +v ++G g Wk+I + + Rt+ ++k++w++++ OWM69815.1 543 RKIWSLEEEDTLRAGVDRFGEGKWKLILNSYRdifEERTEVDLKDKWRNLM 593 566**********************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MDENICRWIL EFLLRQPVDD AVVKLALSSL PLPPDCSLPL GFKKSIVLRT VESALADASI 60 SETLLEHLET LEAIDTELGD PVPGSLKDAY LAVALECTLR CLHGGAEGET MYSDAVQRFW 120 RGRVQAMEAK SQLITAELLQ WSAQLEAALS DDSEREKLMR VETRADALRL VRAYLDEAYV 180 KLGPSFLERA ALSTAIGREA SAPSPNSESA AASAADAAIA PGVNREAPEV RDFAKDVSGP 240 NAGTTCNGHQ SSESAPSSSA ATDTADAANG ASATAPGVNR EAPEVRDSAK DATGPKTDDD 300 PAGAGAATTP GERENREAPE VRDSAKDASG PNADTPCSAH QSVAAKRKNE RLRRVVPSRT 360 KQEPLHRRRG GIKITDTGEM GGQTSGSSYD SLPTALVDKV HEALKSSSLE LQRAVKDPLP 420 EAMRVAASLV ADGADRATNP ESMPPDQIGK DVSATDPSLD KSATDAAPSK SGNCEAQHCG 480 PLIVLPRRSL MERNRSAQTY EWDDSLDGTS DQKGRPRLHS PKGLVVSPLK KVEPENVPKR 540 RPRKIWSLEE EDTLRAGVDR FGEGKWKLIL NSYRDIFEER TEVDLKDKWR NLMR

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MDENICRWIL EFLLRQPVDD AVVKLALSSL PLPPDCSLPL GFKKSIVLRT VESALADASI  60
SETLLEHLET LEAIDTELGD PVPGSLKDAY LAVALECTLR CLHGGAEGET MYSDAVQRFW  120
RGRVQAMEAK SQLITAELLQ WSAQLEAALS DDSEREKLMR VETRADALRL VRAYLDEAYV  180
KLGPSFLERA ALSTAIGREA SAPSPNSESA AASAADAAIA PGVNREAPEV RDFAKDVSGP  240
NAGTTCNGHQ SSESAPSSSA ATDTADAANG ASATAPGVNR EAPEVRDSAK DATGPKTDDD  300
PAGAGAATTP GERENREAPE VRDSAKDASG PNADTPCSAH QSVAAKRKNE RLRRVVPSRT  360
KQEPLHRRRG GIKITDTGEM GGQTSGSSYD SLPTALVDKV HEALKSSSLE LQRAVKDPLP  420
EAMRVAASLV ADGADRATNP ESMPPDQIGK DVSATDPSLD KSATDAAPSK SGNCEAQHCG  480
PLIVLPRRSL MERNRSAQTY EWDDSLDGTS DQKGRPRLHS PKGLVVSPLK KVEPENVPKR  540
RPRKIWSLEE EDTLRAGVDR FGEGKWKLIL NSYRDIFEER TEVDLKDKWR NLMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	3e-17	MYB_related family protein