PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69848.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 199aa    MW: 21973.7 Da    PI: 9.3207
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.68e-12249454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   A+e+Ik+L
  OWM69848.1  2 SHIAVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGAIEFIKEL 49
                89************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MSHIAVERNR RRQMNEHLKV LRSLTPCFYI KRGDQASIIG GAIEFIKELH QVLQSLEAKK  60
RRKSLSPSSP SPSPRPLQLI GATPPPDSPF SFGCAAANKE LAGGACCNSR FADIEARISG  120
SNVILKVIAR RIPGQIVKII AVLEKLSFEI LHLNISSMED TVLYSFVVKI GLECRLSLEE  180
LVLEIQKSFS PDTMYAAEA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.18e-80bHLH family protein