PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69934.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family LBD
Protein Properties Length: 132aa    MW: 14202.1 Da    PI: 9.45
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69934.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26070.63.2e-221482177
      DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGav 77
                +C aCk+l+r+Ca++C++a+         fa vhk+FGasnv+k+l ++pee+red+++sl+y+Aear+ dP   a 
  OWM69934.1 14 SCTACKLLKRRCAPSCIFAQQ--------FAKVHKVFGASNVSKILGEVPEEQREDTVNSLAYKAEARLWDPSTAAQ 82
                6*****************987........999****************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MPQRSGHEVR SSSSCTACKL LKRRCAPSCI FAQQFAKVHK VFGASNVSKI LGEVPEEQRE  60
DTVNSLAYKA EARLWDPSTA AQGPSPYCSG RWPSSSTTLP LPGPASPGSR PQQWLRAQSG  120
PPEGSSIMTT PM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.12e-37LBD family protein