PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69979.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WOX

Protein Properties

Length: 181aa MW: 20657.4 Da PI: 9.7166

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69979.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.1	9.9e-21	28	89	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF+ r+ps++++++++++l +++ ++V++WFqN++a+e++ OWM69979.1 28 KCGRWNPTTEQVKVLTDLFRAgLRTPSTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 89 568***************99************************************97 PP
2	Wus_type_Homeobox	113.7	9.5e-37	28	91	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l+++GlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ OWM69979.1 28 KCGRWNPTTEQVKVLTDLFRAGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 91 678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MEEGLSGRFY IKAAGGVRGS GGGGGGTKCG RWNPTTEQVK VLTDLFRAGL RTPSTDQIQK 60 ISSQLSFYGK IESKNVFYWF QNHKARERQK RRKVSVDEKD VNIRREEKIP QPKYFAEVTN 120 HVVEPAADRV IQTLQLFPIT SFDEPEPAEK LRLRVGECRE FAHTFVSDID HPPLDLRLSF 180 F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	2e-50	WOX family protein