PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69988.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 285aa MW: 32652.7 Da PI: 9.2961

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.6	2.5e-07	26	71	3	46
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 rWT eE +++ +a + + ++ +W Ia +++ g+++ ++ +++ OWM69988.1 26 RWTREENKQFERALAVFDKEtpdRWVNIALMIP-GKSPLDVMTKYRE 71 9***************99*********.******99986 PP
2	Myb_DNA-binding	42.5	1.5e-13	124	168	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++++ ++G+g+W+ I+r +t+ q+ s+ qky OWM69988.1 124 PWTEEEHRRFLQGLLKYGKGDWRNISRNYVVSKTPTQVASHAQKY 168 7***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MELETFFQNT HFSINSGDWL LTPSTRWTRE ENKQFERALA VFDKETPDRW VNIALMIPGK 60 SPLDVMTKYR ELEEDLIEIE AGRVPIPWYF GPSLTLEGRD YDGLRKKGSA AGRVSDQERK 120 KGIPWTEEEH RRFLQGLLKY GKGDWRNISR NYVVSKTPTQ VASHAQKYFI RQQLSSNSNS 180 KDNRRRPSIH DITTRNLTDS SLPLSENNLD IIANDCNNSS STRPLSEQKP NFCSTRPSSG 240 LCDVAPSGLR LQEKDLRLGA FRGFGIKPSS NPLFEVQSTM YRIYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11280.1	4e-71	MYB family protein