PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70047.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 761aa    MW: 84370.4 Da    PI: 5.8127
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS390.71.6e-1193887582374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL+ cA+a++++d + a+ lL +++ ++sp+gd mqR+a+yf+ +L+arla+ ++++ykal ++  s    +++l+a++l+  ++P+ k+s++  N+
  OWM70047.1 388 RTLLTICAQAIAANDRRSANDLLGQIRRHSSPTGDGMQRMAHYFADGLEARLAGAGTKIYKALMANLPS---AADVLKAYHLYLTICPFRKISNFFSNK 483
                 789************************************************************999998...8************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +I++ +e+++++Hi+Df+i++G+QWp+L+q L+sRp+gpp+lRiTg++ p++g   ++++eetg+rL ++A+++gvpfef++ +a+r+e++ le+Lr++
  OWM70047.1 484 TIMNMAEKATKLHIVDFGIMYGFQWPCLIQRLSSRPGGPPKLRITGIDLPQPGfrPADRVEETGRRLDNYAKTFGVPFEFKA-IAQRWETILLEDLRIE 581
                 ****************************************************9*****************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 p+E+l+Vn++++l +lld++v ++++rd vL+l+k+++P+v+v+   +  ++++ F +rf eal +ys++fd+lea++pr+  eri +E++++gre++n
  OWM70047.1 582 PDEVLVVNCMFRLRNLLDDTVMVDNPRDIVLELIKKMNPNVFVLGIVNGAYSAPFFITRFREALFHYSTVFDTLEANVPRDIPERILIENKIFGREVMN 680
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 v+acegaer+er et+++ + r ++aGF+++pl+e++++ ak  ++ ++ + ++++e+  +l++gWk+r L+++S W+
  OWM70047.1 681 VIACEGAERIERPETYKQCQVRAHRAGFSQLPLDEEIVDMAKNRVKSYYHKDFEINEDGRWLLQGWKGRILYALSTWK 758
                 *************************************************889*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 761 aa     Download sequence    
MGGIKGDLNP TCFSSREVHE LPSLLRLPIG SGVVEIDTTT LFLNESDEST EKSGGIEDVI  60
PLNLDRESSA KLGDVSSSMN GGIGYDLLDR LSLLDTVIDE NQSRYRKVPS LPPERGLAGS  120
ARESVEDYDF SDVVLKYISQ MLMEEDIEGK TCMFQESAAL LAAEKSLYEV IGKKYPPSPD  180
HHPVSVESSL GSPDETSACS CITANIGNTV DRNNDSHGPE SSSTASQSVA DFSSSYGFAD  240
SPMSTLQLPQ IFTDSQSMSQ FMKGFEEASK FLPDDSSLIL GSTSNGQSDK NSNPNNFSSN  300
GSRGKKNPHP DAADHGESRS HKQSALSSQS TVSSEMFDMV LLGCGGGDAA LRESLQSAQH  360
QDGKIKGPNE GKSRRKKQGR KRDVVDMRTL LTICAQAIAA NDRRSANDLL GQIRRHSSPT  420
GDGMQRMAHY FADGLEARLA GAGTKIYKAL MANLPSAADV LKAYHLYLTI CPFRKISNFF  480
SNKTIMNMAE KATKLHIVDF GIMYGFQWPC LIQRLSSRPG GPPKLRITGI DLPQPGFRPA  540
DRVEETGRRL DNYAKTFGVP FEFKAIAQRW ETILLEDLRI EPDEVLVVNC MFRLRNLLDD  600
TVMVDNPRDI VLELIKKMNP NVFVLGIVNG AYSAPFFITR FREALFHYST VFDTLEANVP  660
RDIPERILIE NKIFGREVMN VIACEGAERI ERPETYKQCQ VRAHRAGFSQ LPLDEEIVDM  720
AKNRVKSYYH KDFEINEDGR WLLQGWKGRI LYALSTWKPA C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein