PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70079.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 191aa MW: 20737.8 Da PI: 8.4076

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70079.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0017	42	64	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H OWM70079.1 42 FECKTCNRQFPSFQALGGHRASH 64 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MKRSIGETEF IDSISMANCL ISLSRGPDVD LAEGDLSPGR VFECKTCNRQ FPSFQALGGH 60 RASHKKPRLN PPEDQETAGP GSPMKPKTHE CSVCGLEFAI GQALGGHMRR HRLNMNDHHP 120 HEATLSTALS LLPPPPLTAR HVGPVVKKSN GQRVLCLDLN LTPSQNDTNF RLGKAAAPAL 180 DFPVWLALLI V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	1e-36	C2H2 family protein