PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70170.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 1694aa MW: 182889 Da PI: 5.5814

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.6	1.7e-09	798	841	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eE e+++d + +G++ +++Ia+ + ++t +c+ +++k + OWM70170.1 798 PWTPEEREIFLDKLAAFGKD-FRKIASFLD-HKTTADCVQFYYKNR 841 8***************99.*****.**********975 PP
2	Myb_DNA-binding	30.3	9.5e-10	1013	1053	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE lv+av +G++ ++ I+r++ +R+ qck ++ OWM70170.1 1013 DWTDEEKAALVQAVSSYGKD-FAMISRCVR-TRSVDQCKVFFS 1053 6***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1694 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSESLGTAPR WRESSSSHHG GSRSFPRWGS ADFRRPPGHG 60 KQGGWHLFPD ESGHAYMPSR SADKFSEDDG GRRSVFRGDG KYSRSYRDNR VSFAQRDWKS 120 GHSWETSNGS LHTPSRPNDM SSNNPRSVDV VTYTPPHSDP GNAWDSRQLH LKDQHEKVNG 180 VDGLNTGQKC DGENPLGCLE WKPLKWSRSG SLSSRGSGLS HSSSSKSMGG VDSNEAKVGS 240 VSVNVINSVQ SPSGDAAVCA NSTAPSEEMT SRKKPRLGWG EGLAKYEKKK VEGPDEVASR 300 NGLEVCHSLG VNVADKSPRV VGFSDCASPA TPSSVACSSS PGVEEKSFVK NINVDNEVNN 360 LCESPGPASQ NRQEGVVFNL EKLDMSSVHT LGHSLAEFLQ SDDASSVDYS FVRSTAINKL 420 ILLKDDALKA LEVTEMEIDK LENELKLLTS DSRNNCLCTA SSSSPSAEGK AGTLEDKYDA 480 SNLITRPAPL QIVSAGDVDR GGLPPCNGDL EERHANIKDE DVDSPGTVTS KFVEPTAHAT 540 VPASSNVFSQ SKCSEDLNAM QSTGNERDQS VFDSLIARTG VDNSTVVDGM KDNSVNDVSA 600 LSSENMLCQS ILTANKEAAS KASEALLMLL PRNEAKVILG GADVTCDPSD SSIKEKFAMR 660 KRLSMFKERA ITLKFKALHH LWKEDMRLPS LRKSRVKSQK KFESSLRIIL NGYQKHRSSI 720 RSHFSSPVGN LSLVPTKEVV SYASKLLSDP QAVCYRSNLK MPAMILDERE KTASSFISNN 780 GLVEDPCAFE KERAVINPWT PEEREIFLDK LAAFGKDFRK IASFLDHKTT ADCVQFYYKN 840 RKSDCFERTK KKLEFGKQGK SFSNNTYLVT SAKKWNREMN TVSLDVLGDA SLLAAQSEGK 900 ILEPKMFSGM FSLGGCSNSR LSEGDCGVLE RTSSLDTLGS DREAVAADVL AGICGSFSSE 960 AMSSCITSSH DPGELKNQKA DAVTKRPLPS DVMENLEDET CSGESCGEME PSDWTDEEKA 1020 ALVQAVSSYG KDFAMISRCV RTRSVDQCKV FFSKARKCLG LDVMHPQAGP TCSPPTDDDN 1080 GGVDSDVDDT CALGNRSAVC SDKAGSKMEE LPLSVMTRAE DDVSDPLTTL DLQNEANRSE 1140 NVRMDVEEEV KGVEGSFCDT SKYGPMLVEA HVYHVSEQAG PEESAAPVTG AEVGSSTGLG 1200 TPSEPKSVQE DSHPSSSSSP SVVEEPLLAK KGENNRNDGS GTQCVVQVRD AGVDTSNPDV 1260 GMGGVLGFNL NSDSKGSMLD SVETPSFKPL PQEKAATTCQ SEHRSTLDRV SSGGFDLSVS 1320 AEKLGFAGIG HSLNGMESSQ ILRGYPIQVP TEEMNRDSSH CPEFLDSQSL PKSDSSFTAQ 1380 CMPSLQDCFL RKCSTANSHS SVSEHPLGKQ SSNQRSSLPN SHVQSSTETD KPSGTGDFKL 1440 FGQILSNPPP QQKPNSNNHE SDEKGPLQTK FTVSSSSSTP TSSLNGDGSS TMLKYDRNGY 1500 MGLSNIPLRS YGFWDGSKIQ TGFSTLPDSS LLLAKYPAAF SNYPVSASKV DPQPLHAAVS 1560 KTSDLNGFTA KELSNGNGAM DYQVFRARDS ASKVQPFTLE MKQRQDNTYP DLPRCNGFEA 1620 ISGIQQPAVG MIAMNVVGRG VLVGGPCNGV SDPVTAIKMH YAQSEQLGGG AGGVGTGNIT 1680 REDELWRGKG DVGR

Sequence ? help Back to Top

Protein Sequence Length: 1694 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSESLGTAPR WRESSSSHHG GSRSFPRWGS ADFRRPPGHG  60
KQGGWHLFPD ESGHAYMPSR SADKFSEDDG GRRSVFRGDG KYSRSYRDNR VSFAQRDWKS  120
GHSWETSNGS LHTPSRPNDM SSNNPRSVDV VTYTPPHSDP GNAWDSRQLH LKDQHEKVNG  180
VDGLNTGQKC DGENPLGCLE WKPLKWSRSG SLSSRGSGLS HSSSSKSMGG VDSNEAKVGS  240
VSVNVINSVQ SPSGDAAVCA NSTAPSEEMT SRKKPRLGWG EGLAKYEKKK VEGPDEVASR  300
NGLEVCHSLG VNVADKSPRV VGFSDCASPA TPSSVACSSS PGVEEKSFVK NINVDNEVNN  360
LCESPGPASQ NRQEGVVFNL EKLDMSSVHT LGHSLAEFLQ SDDASSVDYS FVRSTAINKL  420
ILLKDDALKA LEVTEMEIDK LENELKLLTS DSRNNCLCTA SSSSPSAEGK AGTLEDKYDA  480
SNLITRPAPL QIVSAGDVDR GGLPPCNGDL EERHANIKDE DVDSPGTVTS KFVEPTAHAT  540
VPASSNVFSQ SKCSEDLNAM QSTGNERDQS VFDSLIARTG VDNSTVVDGM KDNSVNDVSA  600
LSSENMLCQS ILTANKEAAS KASEALLMLL PRNEAKVILG GADVTCDPSD SSIKEKFAMR  660
KRLSMFKERA ITLKFKALHH LWKEDMRLPS LRKSRVKSQK KFESSLRIIL NGYQKHRSSI  720
RSHFSSPVGN LSLVPTKEVV SYASKLLSDP QAVCYRSNLK MPAMILDERE KTASSFISNN  780
GLVEDPCAFE KERAVINPWT PEEREIFLDK LAAFGKDFRK IASFLDHKTT ADCVQFYYKN  840
RKSDCFERTK KKLEFGKQGK SFSNNTYLVT SAKKWNREMN TVSLDVLGDA SLLAAQSEGK  900
ILEPKMFSGM FSLGGCSNSR LSEGDCGVLE RTSSLDTLGS DREAVAADVL AGICGSFSSE  960
AMSSCITSSH DPGELKNQKA DAVTKRPLPS DVMENLEDET CSGESCGEME PSDWTDEEKA  1020
ALVQAVSSYG KDFAMISRCV RTRSVDQCKV FFSKARKCLG LDVMHPQAGP TCSPPTDDDN  1080
GGVDSDVDDT CALGNRSAVC SDKAGSKMEE LPLSVMTRAE DDVSDPLTTL DLQNEANRSE  1140
NVRMDVEEEV KGVEGSFCDT SKYGPMLVEA HVYHVSEQAG PEESAAPVTG AEVGSSTGLG  1200
TPSEPKSVQE DSHPSSSSSP SVVEEPLLAK KGENNRNDGS GTQCVVQVRD AGVDTSNPDV  1260
GMGGVLGFNL NSDSKGSMLD SVETPSFKPL PQEKAATTCQ SEHRSTLDRV SSGGFDLSVS  1320
AEKLGFAGIG HSLNGMESSQ ILRGYPIQVP TEEMNRDSSH CPEFLDSQSL PKSDSSFTAQ  1380
CMPSLQDCFL RKCSTANSHS SVSEHPLGKQ SSNQRSSLPN SHVQSSTETD KPSGTGDFKL  1440
FGQILSNPPP QQKPNSNNHE SDEKGPLQTK FTVSSSSSTP TSSLNGDGSS TMLKYDRNGY  1500
MGLSNIPLRS YGFWDGSKIQ TGFSTLPDSS LLLAKYPAAF SNYPVSASKV DPQPLHAAVS  1560
KTSDLNGFTA KELSNGNGAM DYQVFRARDS ASKVQPFTLE MKQRQDNTYP DLPRCNGFEA  1620
ISGIQQPAVG MIAMNVVGRG VLVGGPCNGV SDPVTAIKMH YAQSEQLGGG AGGVGTGNIT  1680
REDELWRGKG DVGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-148	MYB family protein