PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70452.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB
Protein Properties Length: 313aa    MW: 35396.5 Da    PI: 6.2339
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.62.8e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEde+l   +k++G g+W++ +++ g+ R++k+c++rw +yl
       OWM70452.1 14 KGPWTAEEDEILRSFIKKHGHGNWRALPKHAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding52.11.5e-1667110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T+eE+e ++++++ lG++ W++Ia++++ gRt++++k+ w++
       OWM70452.1  67 RGNFTKEEEETIIKLHASLGNK-WSLIASHLP-GRTDNEVKNMWHT 110
                      89********************.*********.*********9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MVRAPCCWRK GLKKGPWTAE EDEILRSFIK KHGHGNWRAL PKHAGLLRCG KSCRLRWTNY  60
LRPDVKRGNF TKEEEETIIK LHASLGNKWS LIASHLPGRT DNEVKNMWHT RLKKRVLNLK  120
EHRPDGSNIS IPSEEQSQEP SNWGSPPPPG FEVGSTNTVQ VHDYPIFSPQ HALEFNVEST  180
STVQVPDYSI FSPQHSYSGI SRVLTGGAND YKAETVGTKI DLIDSLGPFP ELDGSFWSDS  240
VSADYSMVQW EFAFYGGDIL QLPGEVDSFT KANNDQMGIW RDDDPNHLVL NDGLDFWYDL  300
FVHSEGFGSS SNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.12e-68MYB family protein