PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70658.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 219aa MW: 25317.6 Da PI: 8.9703

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.7	1.3e-18	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT eEd++l d+v +G+g+W++Ia++ g++R++k+c++rw++yl OWM70658.1 18 RGLWTVEEDKILMDYVMVHGKGHWNLIAKRTGLKRCGKSCRLRWLNYL 65 788*******************************************97 PP
2	Myb_DNA-binding	60.8	2.9e-19	71	116	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r+++T+eE++l+++++++lG++ W++Ia++++ gRt++q+k++w+++l OWM70658.1 71 RDSFTEEEEDLIIRLHRLLGNR-WSLIAKRVP-GRTDNQVKNYWNTHL 116 789*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MTKTKGKGDD NNGGQYKRGL WTVEEDKILM DYVMVHGKGH WNLIAKRTGL KRCGKSCRLR 60 WLNYLRPDVK RDSFTEEEED LIIRLHRLLG NRWSLIAKRV PGRTDNQVKN YWNTHLSRKL 120 GIRKEGARVD SARVLSEASK ASSSVNSTDF ACTNDVVGES AETTKMFVET RESCHQRTEV 180 HQEQNMMREN CGMNSLWDLD SVTTLIQDYL NNDLSWFNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	4e-70	MYB family protein