PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70665.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HD-ZIP

Protein Properties

Length: 254aa MW: 28917.3 Da PI: 4.6513

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.2	1.4e-18	65	118	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq+ Le++Fe ++++ ++++eL+k l L+ rqV +WFqNrRa++k OWM70665.1 65 KKRRLSAEQVYLLETAFEAENKLEPDRKTELSKMLALPPRQVAIWFQNRRARWK 118 56689************************************************9 PP
2	HD-ZIP_I/II	119.8	1.4e-38	64	156	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls+eqv lLE+ Fe+e+kLep+rK+el++ L l prqva+WFqnrRAR+ktkqlE++y++Lk+ y +l + +++ k++e+Lr+e+++ OWM70665.1 64 EKKRRLSAEQVYLLETAFEAENKLEPDRKTELSKMLALPPRQVAIWFQNRRARWKTKQLERNYDHLKSLYSSLLIDYDSVVKDNEKLRSEVTS 156 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MEPGSIVFDA SACQGNMLFL GNGDSLFRGG RSVVASDESS NRRPFFGSPE EMFGDEYYDD 60 QSPEKKRRLS AEQVYLLETA FEAENKLEPD RKTELSKMLA LPPRQVAIWF QNRRARWKTK 120 QLERNYDHLK SLYSSLLIDY DSVVKDNEKL RSEVTSLNEK LHGMRFRFAG QGPCVAPIDE 180 TPLKAEEGLN TGSGRSSVVD EECPWHINSS RLYFLGDGGL MDVVKSEEYD SGVDDQSHFC 240 NMFGELPMGW WAWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	121	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	4e-67	HD-ZIP family protein