PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70713.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 309aa    MW: 34422.6 Da    PI: 5.9864
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.33.9e-20117218199
                 EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+l++sdv++++r++lpkk ae+h    +  ++e++ +++ d +g  +W++k+++  +++s++yvl+ ++ +Fv+ +gL+ gDf++ +  +++++++
  OWM70713.1 117 FEKELKNSDVGSLRRMILPKKAAEAHlpvlE--SKEGIPISMHDIDGlHVWSFKYRFwpNNNSRMYVLE-NTGDFVNTHGLQLGDFIMVYQ-DDENQNY 211
                 99**************************554..557788********9*******9989999999***9.*******************93.3488889 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 v++++++
  OWM70713.1 212 VIQARKA 218
                 9998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MTDGRIIIVP QSAAQKNELG GAVALERDRV AASATARKLP GGGTRPEPGR DLVAAAGAGV  60
GVHRKKRNMA RQRRPAIKFL SFANSCNSSS SSSSHVPPEP SPAPARGLDP RRLRFLFEKE  120
LKNSDVGSLR RMILPKKAAE AHLPVLESKE GIPISMHDID GLHVWSFKYR FWPNNNSRMY  180
VLENTGDFVN THGLQLGDFI MVYQDDENQN YVIQARKASD EEDVYRDIAK STINDLCLQD  240
NYDQENKVSS FNYEYYPIID DVGMSFIYDT TFSSDSPLDF LGGSMTNFTR IGPPESFGSV  300
ENLSLDDFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.15e-91B3 family protein