PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70719.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 259aa    MW: 29558.8 Da    PI: 10.753
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM112.44.7e-35171481128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya.tgk.rknra.....tksgyWkatgkdkev 92 
                 lp+GfrF+Ptdeel+v+yLk+kv + +l++ +vi+e+d+++++Pw Lp  +   +++ +fFsk+ +k + + + +++ra       sgyWk tgk+k++
  OWM70719.1  17 LPVGFRFRPTDEELLVHYLKRKVLSVPLPA-RVIPELDVLRTNPWGLPGDM---RERRHFFSKTTEKRHpNLHfKHRRAafrelSGSGYWKLTGKEKRI 111
                 79****************************.99***************554...34679999887776634332444444555566************* PP

         NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +++ +++++g+++ Lvf +g++ +  k++W+mhe rl
  OWM70719.1 112 VARgSKQVIGMRRNLVFREGENLSCAKSQWIMHELRL 148
                 **9667779*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MESKPSIVLG NGGEIRLPVG FRFRPTDEEL LVHYLKRKVL SVPLPARVIP ELDVLRTNPW  60
GLPGDMRERR HFFSKTTEKR HPNLHFKHRR AAFRELSGSG YWKLTGKEKR IVARGSKQVI  120
GMRRNLVFRE GENLSCAKSQ WIMHELRLLS TQTASDSTHF RNETMPPAVE NGEGEWAVYR  180
VFQRRIKQPN SKKKNRIVSA PQPISQTPTE INFRNEVQDL MGRGSGSDPL PPPPPSPCSS  240
LCTRDHGQEI PTAFDDFSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.18e-45NAC family protein