PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70726.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 680aa    MW: 74536.1 Da    PI: 6.3011
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70726.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS429.42.9e-1313056791374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetsekn...........sseelaalklfse 86 
                 lv+lLl+cAeavs++d+ la+++L +ls  +sp gd+mqR+a++fteAL+arl+    +  +++a   s+ s+             s+e l++++++++
  OWM70726.1 305 LVHLLLACAEAVSKEDFMLARKYLHHLSRVVSPLGDSMQRVASCFTEALSARLTAtlATRPTSSAG-GSAFSSALkpppfspfppnSIEILKIYQILYQ 402
                 68***************************************************9842222233222.111111113455566667799999999***** PP

        GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                 ++P++kf+h+taNqaI ea+e eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+    + ++++etg+ L+++A++l++pfef++ v ++
  OWM70726.1 403 ACPYIKFAHFTANQAIFEAIEFEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGP----NLDSVRETGRCLTELAHSLHIPFEFHP-VGEQ 496
                 ***************************************************************....99*************************.7*** PP

        GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                 ledl++++L+ + gEalaVn+v +lhr++   ++l      +L ++++  P++v++veqea+hn++ Fl rfleal++ysa+fdsl+a++p++s++r+k
  OWM70726.1 497 LEDLRPHMLHRRVGEALAVNSVSRLHRVP--GHCLGP----LLAMIRDQAPNIVTLVEQEASHNGPYFLSRFLEALHFYSAIFDSLDATFPPDSSQRAK 589
                 ****************************9..566666....********************************************************** PP

        GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 vE+ ++++ei n+va+egaer++rhe+l kWr+ +e  GFk +pls +a++q k ll  ++ dgyr+ e++g+l+lgW+dr+++++SaWr
  OWM70726.1 590 VEQYIFAPEILNIVAHEGAERTARHERLDKWRKIMEGKGFKGIPLSGNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWR 679
                 *****************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 680 aa     Download sequence    
MGILRSEGSS SCNKMPQEHH EPSSPTESSS ISKSTKNKIK ESSMGTGSSN SMMSLTPPSL  60
SFPSHKLQLP DEDIEIQSPT SALLESLLSD QLDGDFMISS PVRTTLPSPP QNPTSYNYAF  120
NNSHAVSSFS PPRFSSLGFL GNNKGKGMSP LHRVYNSPNN NSYMQMDQSS SLALPAIEDL  180
LEEYQKDEYG GAYSHCFDMP DAASASLDGL HIGSSSSSSA FCTGSRTEQP SSRISRLSQE  240
GDMYQMSSVT ANAAVTASTG SASLSQQLQQ ERHQEKQLQE QNVNNLMGPP VPMGLEQEQD  300
SGLQLVHLLL ACAEAVSKED FMLARKYLHH LSRVVSPLGD SMQRVASCFT EALSARLTAT  360
LATRPTSSAG GSAFSSALKP PPFSPFPPNS IEILKIYQIL YQACPYIKFA HFTANQAIFE  420
AIEFEERVHV IDLDILQGYQ WPAFMQALAA RPGGAPFLRI TGVGPNLDSV RETGRCLTEL  480
AHSLHIPFEF HPVGEQLEDL RPHMLHRRVG EALAVNSVSR LHRVPGHCLG PLLAMIRDQA  540
PNIVTLVEQE ASHNGPYFLS RFLEALHFYS AIFDSLDATF PPDSSQRAKV EQYIFAPEIL  600
NIVAHEGAER TARHERLDKW RKIMEGKGFK GIPLSGNAVT QSKILLGLYS CDGYRLTEDK  660
GCLLLGWQDR AIIAASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.14e-93GRAS family protein