PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70731.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TCP

Protein Properties

Length: 296aa MW: 31368.6 Da PI: 9.99

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.6	2.6e-39	67	162	2	94
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssgkaaksa 94 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ + + ss++ s+++a +sa OWM70731.1 67 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALavaGPTAASSQQPGASISAAWASA 162 789******************************************************************888877555555555555555444333 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MDHHKHSPTK QPSQGAPNFL TQHQPNNNMS TGDPNSNNNN NSGHKPSEIK DFQIVIAEKD 60 DAKKQLAPKR SSNKDRHTKV EGRGRRIRMP ALCAARIFQL TRELGHKSDG ETIQWLLQQA 120 EPSIIAATGT GTIPASALAV AGPTAASSQQ PGASISAAWA SAGRPGPTLQ HHQLGPTGFW 180 PPSSSGPSIL GGEGFHPTST GGASTSGNIN LNNMGLVSFT SILSNPPQVV VPGLELGLSH 240 QDVGHHHHHH HHVGGGVHLN PQTLNQIYQQ IGQSRVHNQP QQPPPSKDDS QSSAGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-50	TCP family protein