PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70869.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 237aa    MW: 26319.4 Da    PI: 7.7798
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08122162954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  OWM70869.1 122 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 162
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEEKLVPDYF TGQVDGFPHH CYPDYPHFGS SPSFTTLPSS SSKSSTISFT TSSGTDAPDA  60
EAADFDYKGR GSPVCANNNM AAMREMIFRI AAMQPINIDP EAVKPPKRRN VRISSDPQSV  120
AARHRRERIS ERIRILQRLV PGGTKMDTAS MLDEAIHYVK FLKRQVQSLE RASHADNDGP  180
GEITLGLGFP MPVAADHDSR AGYIDSSTNS MTKGMPSYHY RHQLHAPAQN ERNYANF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.16e-43bHLH family protein