PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71067.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB
Protein Properties Length: 321aa    MW: 36414 Da    PI: 6.168
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.38.3e-192875148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd+ l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
       OWM71067.1 28 RGPWTVEEDLTLINYIAHHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 75
                     89********************************************97 PP
2Myb_DNA-binding51.91.8e-1681124146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE++l++++++++G++ W++Ia++++ gRt++++k++w++
       OWM71067.1  81 RGNITLEEQLLILELHTRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 124
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MDAKVSRRSV SSFQSSDHDD EDQMDLRRGP WTVEEDLTLI NYIAHHGEGR WNSLARCAGL  60
KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG NRWSKIAQYL PGRTDNEIKN  120
YWRTRVQKHA KQLKCDVNSK QFKDTMRYLW MPRLVERIQA ASAAASTTNN SGGSPGGSST  180
ITSATAAATT TDNYYHHQFN SNYMVSQIPP VACTPENSST AATTSSDSFA AQVSPVSDFA  240
DQYNLPIFKN PNTDYDFRVD NQVAFEESFT SPAAYFNYGS SGFPSMEQNN ADDWLDGGET  300
SDSFWNVENI WSLQQQLNNN V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.12e-87MYB family protein