PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71124.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 571aa    MW: 65219.2 Da    PI: 5.0182
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71124.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS269.79.6e-831825572374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsPilkfshlt 97 
                  e L++++e vs++++e+a++lL ++ +l+s++g+p++R++ yf eAL++++ r++ +++++   ++ + +        ++ + + +   P+ ++ ++ 
  OWM71124.1 182 AENLMNAVEKVSNEQFENASSLLDEIDQLCSNTGEPVERIVYYFSEALREKIDRETGQTSDKGLGKKLTIDLdkvIMGPTSQMLACHRRIPFSQILQFS 280
                 578***************************************************88888888766665533323222333333448999********** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl..ele 192
                   q I + v  ++rvHiiD++i +G +W  L+qaLasR+++pp   ++iT++       ++ + etg+rL++fA++l++pf+++v++  ++ dl  ++ 
  OWM71124.1 281 GVQVIIDHVMDARRVHIIDLGIRNGCHWTVLMQALASRRHEPPleLVKITAITT---CLEKDIAETGKRLESFAKTLDLPFSYKVIMLLDMLDLkeDVF 376
                 ***************************************99998889******9...57999***********************98889988855667 PP

        GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres..eerikvErel 289
                 +L  +++E+++V   + l+++ +++  le     ++k++ks++P vvv+ e e++hns++F++rf+e+l yysa fdsl++ +   +  ++r++ E  l
  OWM71124.1 377 DLGEEEKESVVVYADFLLKTMISKPDRLEW----LMKVLKSINPCVVVINEVESNHNSPNFVNRFVESLFYYSAYFDSLDECMEDGDdgQNRRMTESDL 471
                 777788************999977766666....*********************************************9999887789********** PP

        GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +g++i+ ++a+eg+er+ rh + + Wr+ ++++G+++v l+     qa+l++r+++     +++ + +sl++ Wk+ p+ s+SaW+
  OWM71124.1 472 FGQAIRRILAAEGEERNIRHVKIAVWRAFFTRFGMEEVDLGMASLYQAELVVRRFPcRSSCTLDLDGKSLIIRWKGIPIHSLSAWK 557
                 ********************************************************9888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    
MDELNSFNRS DESYELEGQG DFDSNFHSLP DYGFSNFMEE DYQQSPDSDH GLLNNLRLDM  60
ASPPIHTCLE EIAKLERITN EDLKRGKHKN PPSLASLELL KSHGTGFKKL TGERIIEATC  120
PVQIRPDRVR LSVIEIMRIA GVKLVHSASK MNEDNPSDIP GHRYGHHCSD LTGIEVKNVH  180
LAENLMNAVE KVSNEQFENA SSLLDEIDQL CSNTGEPVER IVYYFSEALR EKIDRETGQT  240
SDKGLGKKLT IDLDKVIMGP TSQMLACHRR IPFSQILQFS GVQVIIDHVM DARRVHIIDL  300
GIRNGCHWTV LMQALASRRH EPPLELVKIT AITTCLEKDI AETGKRLESF AKTLDLPFSY  360
KVIMLLDMLD LKEDVFDLGE EEKESVVVYA DFLLKTMISK PDRLEWLMKV LKSINPCVVV  420
INEVESNHNS PNFVNRFVES LFYYSAYFDS LDECMEDGDD GQNRRMTESD LFGQAIRRIL  480
AAEGEERNIR HVKIAVWRAF FTRFGMEEVD LGMASLYQAE LVVRRFPCRS SCTLDLDGKS  540
LIIRWKGIPI HSLSAWKFQQ PEEEKYDDSH L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.12e-51GRAS family protein