PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71142.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 283aa    MW: 32396.4 Da    PI: 4.7882
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71142.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.82.9e-095292348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W++Ia +++ gRt++++k++w+++l
       OWM71142.1  5 RWSLIAGHLP-GRTDNEIKNYWNSHL 29
                     4*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MSVTRWSLIA GHLPGRTDNE IKNYWNSHLS RKIYNFRKLP LLPPRNGEEQ PRTGRIATPT  60
LTRPLPRKRG RGRTSRSSMK THKEFKSSMA IQKNSNSSDN PKQPKAPQDS SSITEQQSGQ  120
LSDSLRETGG DEDEQATEGP YEWLDNELKR LDHFLRSESE MNLCSGEEAV AAAEAEKETD  180
FAADSSSKRM ENVENGCRAQ WHHDFSCCFD EWLDWTVGSR MDQFENEGQE MMLSSWLWDS  240
SNYDNGDRMD QLENEGQELM SSSWLWNSSD SNNGNDVEKI TKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.18e-16MYB family protein