PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM71256.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NF-YB

Protein Properties

Length: 161aa MW: 17969.7 Da PI: 4.6363

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM71256.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	165.5	7.1e-52	18	111	2	95
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 +eqd +lPianv+rimk++lP nakisk+aket+qecvsefisfvtseas+kc++e+rkt+++dd++wa+atlGf+dy+ plk+yl++yre e+ OWM71256.1 18 KEQDMLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKTVTSDDICWAMATLGFDDYAGPLKQYLERYRESEE 111 89*****************************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MAGNTGNSTS EDGGSAIKEQ DMLLPIANVG RIMKQILPPN AKISKEAKET MQECVSEFIS 60 FVTSEASEKC RKERRKTVTS DDICWAMATL GFDDYAGPLK QYLERYRESE EGDRAKQERS 120 QDEDKSSYRD QRGADGDEAE ASARPYGIER SNSASYSSRP F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	1e-54	NF-YB family protein