PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71302.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NF-YA
Protein Properties Length: 174aa    MW: 19288.9 Da    PI: 10.2007
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71302.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.39.2e-3278134158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep++VNaKQy++I++RRq Rak+e e+k   ksrkpylheSRh hAlrR+Rg+gGrF
  OWM71302.1  78 EEPVFVNAKQYHGIMRRRQIRAKAELENKA-LKSRKPYLHESRHLHALRRARGCGGRF 134
                 69***************************9.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MTVPNVQYAT PPPLAAGPAM VPPAYPYPDP YYRSIFAPAP YDAQSYPPQQ AYNPQPMVHL  60
QLMGIQQAGV PLPSDAVEEP VFVNAKQYHG IMRRRQIRAK AELENKALKS RKPYLHESRH  120
LHALRRARGC GGRFVNSKKN EGKQNEVGTG EKSQQNINLN NADKKDISAS AGKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.24e-53NF-YA family protein