PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM71340.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 562aa MW: 59721.6 Da PI: 6.0508

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM71340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.7	2.7e-08	204	248	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r+ W++ Ed+ l+ av++ G g+W+ I + Rt+ q+ rw OWM71340.1 204 RKQWSEAEDLELIAAVRKCGEGNWANILKANFkGDRTAAQLSQRW 248 789************************886555699999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MENRKKRSIT EEDISILLQR YPATTLLALL QEVAQFEQVR INWHELVKRS STGISSPREY 60 QMLWRHLAYR DALFEKSDDG VEPLLNFACK DDDSDLEYEL EALPAVSGEA SAEVAASVKV 120 LISSGLTSDG TLPKKSSVEA PLTINIPNGQ PFRASSEGSR PTCLVQGMKN TANPVSIEKS 180 SLPPSVTGNE GSDPNGNMLS KKKRKQWSEA EDLELIAAVR KCGEGNWANI LKANFKGDRT 240 AAQLSQRWAI IRKRQGNSNL SVSNLTTASQ LSEAQLATRH AVSVALDMHV KPLRTGTFSS 300 STLGQQAQNQ TRQVPEPRKL TLLVSPSVPP LNSSASSVKT SPKENNINNS HDDMVIKAAA 360 VAAGARIATP SDAASLIKAA QSKNAVHIIP RGSSLKAASV TGVATTKSAH QTSPPAQSGH 420 AASTSATSHN IPGKDARPTV QNSPSDAAIS PQEQDIESEG GKVATELSNM LQEPVPGEDV 480 ARALGNEGGT QMQEDAVLHC VNADLPANQN SDALTNREVL TTVSVGGASE GDQPAEGEKA 540 GQAVSEEKCE KESLKGEALD SR

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MENRKKRSIT EEDISILLQR YPATTLLALL QEVAQFEQVR INWHELVKRS STGISSPREY  60
QMLWRHLAYR DALFEKSDDG VEPLLNFACK DDDSDLEYEL EALPAVSGEA SAEVAASVKV  120
LISSGLTSDG TLPKKSSVEA PLTINIPNGQ PFRASSEGSR PTCLVQGMKN TANPVSIEKS  180
SLPPSVTGNE GSDPNGNMLS KKKRKQWSEA EDLELIAAVR KCGEGNWANI LKANFKGDRT  240
AAQLSQRWAI IRKRQGNSNL SVSNLTTASQ LSEAQLATRH AVSVALDMHV KPLRTGTFSS  300
STLGQQAQNQ TRQVPEPRKL TLLVSPSVPP LNSSASSVKT SPKENNINNS HDDMVIKAAA  360
VAAGARIATP SDAASLIKAA QSKNAVHIIP RGSSLKAASV TGVATTKSAH QTSPPAQSGH  420
AASTSATSHN IPGKDARPTV QNSPSDAAIS PQEQDIESEG GKVATELSNM LQEPVPGEDV  480
ARALGNEGGT QMQEDAVLHC VNADLPANQN SDALTNREVL TTVSVGGASE GDQPAEGEKA  540
GQAVSEEKCE KESLKGEALD SR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	2e-71	MYB_related family protein