PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM71504.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 637aa MW: 70725 Da PI: 7.6636

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM71504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	97.9	1.5e-30	322	464	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 lp+G++F+P+ el+ e+L++k+ + + + ++ke +i++++P++Lp vk++ ++++fF+++ ++y+tg+rk+r+ t++ OWM71504.1 322 LPAGVKFDPSKAELL-EHLAAKCGVGDakphelI---DefipTLKEEkGICYTHPKNLP-GVKKDGSSMHFFHRTVNAYSTGQRKRRKiqngqnliTEN 415 799**********.9999887774555443...133333555558********.7778899****************879999999999 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 +W++tgk+k++++ +g ++g kk++v+yk + k++k++Wvmh+y+l OWM71504.1 416 VRWHKTGKTKPIIE-NGVHKGWKKIMVLYKSseKGCKPHKSNWVMHQYHL 464 9*********.999*******6522555778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MAGRSSKRKR AKHNGAQSEL KVSSSGTQKK QKPNQSSFLD KVSSSSSFRV PMRAKLSGGH 60 FRMINEKLYT CTGEEALNYF KEDPSLFDMY HTGYQAQMSQ WPEQPVNKII KWLKDRSPSL 120 LVADFGCGDA CLAKNVKNKV FSFDLVSNDP AVIACDMANT CLESSSVDVA VFCLSLMGVN 180 YPSYLTEAHR VLKPGGWLLI AEVKSRLDPN TGGADPDKFV DAICELGLKS ELKDFSNKMF 240 ALLYFKKKEK SNSKTREIEW PELKPCVYKR RNWLVDGRTI AKKVKNPTWS SASQSPSRDS 300 GANRECPNCH HSIANNHDWP GLPAGVKFDP SKAELLEHLA AKCGVGDAKP HELIDEFIPT 360 LKEEKGICYT HPKNLPGVKK DGSSMHFFHR TVNAYSTGQR KRRKIQNGQN LITENVRWHK 420 TGKTKPIIEN GVHKGWKKIM VLYKSSEKGC KPHKSNWVMH QYHLGTEEDE KGGEFVVSKI 480 SYQPEKHSDV NGGTSAVEDL STSPKTPKPN APPLVVAKAS PIDDVDDSVI PVGDDHECND 540 WLVGESQAYE DQVQGLEDPL LCKEILDPHP HPINPGLDQI VCSTSTRKDD ESTGAYNAPC 600 GISDLANLEF DSPPDFLQND SPLGSQESVL DWLAGLI

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MAGRSSKRKR AKHNGAQSEL KVSSSGTQKK QKPNQSSFLD KVSSSSSFRV PMRAKLSGGH  60
FRMINEKLYT CTGEEALNYF KEDPSLFDMY HTGYQAQMSQ WPEQPVNKII KWLKDRSPSL  120
LVADFGCGDA CLAKNVKNKV FSFDLVSNDP AVIACDMANT CLESSSVDVA VFCLSLMGVN  180
YPSYLTEAHR VLKPGGWLLI AEVKSRLDPN TGGADPDKFV DAICELGLKS ELKDFSNKMF  240
ALLYFKKKEK SNSKTREIEW PELKPCVYKR RNWLVDGRTI AKKVKNPTWS SASQSPSRDS  300
GANRECPNCH HSIANNHDWP GLPAGVKFDP SKAELLEHLA AKCGVGDAKP HELIDEFIPT  360
LKEEKGICYT HPKNLPGVKK DGSSMHFFHR TVNAYSTGQR KRRKIQNGQN LITENVRWHK  420
TGKTKPIIEN GVHKGWKKIM VLYKSSEKGC KPHKSNWVMH QYHLGTEEDE KGGEFVVSKI  480
SYQPEKHSDV NGGTSAVEDL STSPKTPKPN APPLVVAKAS PIDDVDDSVI PVGDDHECND  540
WLVGESQAYE DQVQGLEDPL LCKEILDPHP HPINPGLDQI VCSTSTRKDD ESTGAYNAPC  600
GISDLANLEF DSPPDFLQND SPLGSQESVL DWLAGLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	8	32	RKRAKHNGAQSELKVSSSGTQKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	3e-82	NAC family protein