PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71674.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 199aa    MW: 22471.3 Da    PI: 10.114
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.4e-1755104355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr ++ +g+++AeIrd + ng  +r++lg+f t eeAa a+++a+ + +g
  OWM71674.1  55 YRGVRKRP-WGKYAAEIRDSTRNG--ARVWLGTFNTGEEAALAYDQAAFAVRG 104
                 9*******.**********44465..**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MNSYYSSFNS SDFFSINQYH PFTGNHPITS TPGPLRPNYK FEVSGNSVHK EEVYYRGVRK  60
RPWGKYAAEI RDSTRNGARV WLGTFNTGEE AALAYDQAAF AVRGSAAVLN FPAEVVQRSL  120
VAEDMRSVGI EGGTWEGHSP VLALKKKHYM KRKAESRKRR ESESRLKAAK VKKNVVVLED  180
LGAAFLEEIL RISENPNPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145160KKKHYMKRKAESRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-44ERF family protein