PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM71836.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 363aa MW: 42277.5 Da PI: 6.9017

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM71836.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.2	2.7e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL+kkv++k+++l +vi++vd+yk+ePwdL++ k+ + e+++wyfFs++dkky+tg+r+nratk+g+Wkatg+dk+++s k OWM71836.1 7 VPPGFRFHPTDEELVDYYLRKKVASKRIDL-DVIRDVDLYKIEPWDLQElcKIGTeEQNDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYS-K 103 69**************************.9***********954555552555**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ++l+g++ktLvfykgrap+g+k+dW+mheyrle OWM71836.1 104 QSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIDLDVIR DVDLYKIEPW DLQELCKIGT 60 EEQNDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YSKQSLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEN GTPQARITSL MFLICFIQEE GWVVCRVFKK RMTAVRKMGD 180 YDSPCWYDDQ VSFMPELDSP RQVSQPYASS YRHPYPCKQE LELQYNMPHH DALFLQMPQL 240 ESPNSVVPYV YERNNSTGSN FQTSTLTEQE HMQQIHNQSM STSLFGNSNE QAQDQVTDWR 300 VLDKFVASQL SHDDAGNPKD ATYANPTAFH MANQMNSIES KKQGVSQEFM AVPNSSCQIE 360 LWK

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIDLDVIR DVDLYKIEPW DLQELCKIGT  60
EEQNDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YSKQSLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN GTPQARITSL MFLICFIQEE GWVVCRVFKK RMTAVRKMGD  180
YDSPCWYDDQ VSFMPELDSP RQVSQPYASS YRHPYPCKQE LELQYNMPHH DALFLQMPQL  240
ESPNSVVPYV YERNNSTGSN FQTSTLTEQE HMQQIHNQSM STSLFGNSNE QAQDQVTDWR  300
VLDKFVASQL SHDDAGNPKD ATYANPTAFH MANQMNSIES KKQGVSQEFM AVPNSSCQIE  360
LWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-153	NAC family protein