PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71950.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 260aa    MW: 29042.1 Da    PI: 5.746
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.4e-1186138155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r++ h  +Er+RR+++ s +  Lr++lP      ++K s ++   +A+ YIk+Lq
  OWM71950.1  86 RKTVHRDVERQRRQEMASLYGSLRSHLPVE--ILKGKRSISDHIYQAIGYIKNLQ 138
                 7899*************************6..49********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDYVTSTNIS LDQMDELFQF SSSLPYQEQP QVADELEEIL FAPSPPDWNI PAVEDILGGP  60
PSVEPLAAPL GGTSAEPKRP ESSKKRKTVH RDVERQRRQE MASLYGSLRS HLPVEILKGK  120
RSISDHIYQA IGYIKNLQRK IQVLSDKRDE MKRVSDSKKI DDPKTNKEES PRPRGHQDVV  180
TIEPCIGGIE ITISTDLKQG VALSKVLGFL IREGMTLISC ASTVVNERLL HSIKSEVIGD  240
DGSEIENLSA LREKLMNLSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18598KRKTVHRDVERQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.17e-36bHLH family protein