PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71983.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 198aa    MW: 21741.1 Da    PI: 12.0361
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.9e-184494155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr++  +++Wv+e+r+p +   + r++lg++ tae+Aa+a++ a+++l+g
  OWM71983.1 44 PVYRGVRRRN-NNKWVCELREPAK---QSRIWLGTYPTAEMAARAHDVAALALRG 94
                68*****887.8*********833...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MPESSTFPDS CTPYRYHSDE EHMLASSRPK KRTGRVVFKE TRHPVYRGVR RRNNNKWVCE  60
LREPAKQSRI WLGTYPTAEM AARAHDVAAL ALRGRSACLN FADSAWLLPV PASTDPSTSA  120
ALLLRPRTPS APTSSRTPRG MVPVQAMRKR RRPGAKGARK LLMLSQAVPG RAMGPGTWKA  180
GSKGRSSPRP TAPAAASK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148152RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.12e-44ERF family protein