PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71985.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 237aa    MW: 25755.6 Da    PI: 5.1994
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71985.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.12.5e-144189155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr++   g+Wv+e+r       + r +lg++  +e+Aa+a++ a ++l+g
  OWM71985.1 41 PVYRGVRRRG-GGKWVCELRNG-----KSRLWLGTYPAPEMAARAHDVAVLALRG 89
                68*****999.9******9994.....6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MDRSTEIGLG SKAGSEETYL LASTQPKKRA GRKKFKETRH PVYRGVRRRG GGKWVCELRN  60
GKSRLWLGTY PAPEMAARAH DVAVLALRGR SACLNFADSA WRLPIPSSAS DADIRAVAIE  120
AAEVFRQACK EGASSSSSGL EHEEAVSDAE SSSGSADLRA EEDRHTMANE RLPENGGAGC  180
SYYLDDEAIF SLPGLLVDMA EGLMVAPPPI VLEESSNHWD GDSLYDSDVS IWNHSTW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-56ERF family protein