PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71986.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 199aa    MW: 21849.3 Da    PI: 5.1216
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.42.6e-162675154
         AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54
                + y+GVr++  +++Wv+e+r+    + k+ r++lg++ ta++Aa+a++ a+++l+
  OWM71986.1 26 PVYRGVRRRN-NNKWVCELRE----QaKQSRIWLGTYPTAKMAARAHDVAALALR 75
                68*****887.8******999....5567***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MISLHDLSFH HLLGRGRVVF KETRHPVYRG VRRRNNNKWV CELREQAKQS RIWLGTYPTA  60
KMAARAHDVA ALALRSLSAC LNFADSAWRL PVPASTDPAD IRRAAAEAAN AFRPDKLEDA  120
PGDGTGARNK EEEAAGGQGS EEVVDAIPSS SWAGDGTWDM EGWLEGPLLS PPHGPDSGIQ  180
VEWEEPEPDA EVSLWSFSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.13e-33ERF family protein